Appl Environ

Appl Environ

PRIMA-1MET mouse Microbiol 1993, 59:208–212.PubMed 49. Wheeler DL, Church DM, Federhen S, Lash AE, Madden TL, Pontius JU, Schuler GD, Schriml LM, Sequeira E, Tatusova TA, Wagner L: Database resources of the National Center for Biotechnology. Nucleic Acids Res 2003, 31:28–33.PubMedCrossRef 50. Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ: Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 1997, 25:3389–3402.PubMedCrossRef 51. Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, Valentin F, Wallace IM, Wilm A, Lopez R, Thompson JD, Gibson TJ, Higgins DG: Clustal W and Clustal X version 2.0. Bioinformatics 2007, 23:2947–2948.PubMedCrossRef 52. Grote A, Hiller K, Scheer M, Münch R, Nörtemann B, Hempel DC, Jahn D: JCat: a novel tool to adapt codon usage of a target gene to its potential expression host. Nucleic Acids Res 2005, 33:W526–531.PubMedCrossRef 53. Münch R, Hiller K, Grote A, Scheer M, Klein J, Schobert M, Jahn D: Virtual Footprint and PRODORIC: an

integrative framework for selleck compound regulon prediction in prokaryotes. Bioinformatics 2005, 21:4187–4189.PubMedCrossRef 54. Dunn NW, Holloway BW: Pleiotrophy of p-uorophenylalanine-resistant and antibiotic hypersensitive mutants of Pseudomonas aeruginosa . Genet Res 1971, 18:185–197.PubMedCrossRef 55. Rahme LG, Stevens EJ, Wolfort SF, Shao J, Tompkins RG, Ausubel FM: Common virulence factors for bacterial selleck screening library pathogenicity Selleckchem Erastin in plants and animals. Science 1995, 268:1899–1902.PubMedCrossRef 56. Klausen M, Heydorn A, Ragas P, Lambertsen L, Aaes-Jørgensen A, Molin S, Tolker-Nielsen T: Biofilm formation by Pseudomonas

aeruginosa wild type, flagella and type IV pili mutants. Mol Microbiol 2003, 48:1511–1524.PubMedCrossRef 57. Daniels C, Griffiths C, Cowles B, Lam JS: Pseudomonas aeruginosa O-antigen chain length is determined before ligation to lipid A core. Environ Microbiol 2002, 4:883–897.PubMedCrossRef 58. Abeyrathne PD, Daniels C, Poon KKH, Matewish MJ, Lam JS: Functional characterization of WaaL, a ligase associated with linking O-antigen polysaccharide to the core of Pseudomonas aeruginosa lipopolysaccharide. J Bacteriol 2005, 187:3002–3012.PubMedCrossRef Authors’ contributions JG designed the study and performed the experiments. BB assisted with bioinformatics knowledge and reassembled the JG004 genome sequence. Electron microscopically examinations were done by MR. MS designed the study, did bioinformatic analyses and revised the manuscript. All authors read and approved the final manuscript.

Comments are closed.